labels for custom diverging color gradient in ggplot
I would like to plot some data where I use a custom transformation for a diverging color scale. As shown here, the labels come in funky or sometimes not at all. I would like for the labels to be rounded and to show the value the color represents and not the transformation.
I have been able to successfully apply it to a non-negative scale and I believe it has something do to with the negative numbers or the inverse
call in trans_new
which I don't quite understand from the documentation:
Here are some links that I explored:
R: custom ggplot2 color-transform gives error in labels
GGplot custom scale transformation with custom ticks
https://github.com/tidyverse/ggplot2/issues/980 looks helpful over my head
library(scales)
library(tidyverse)
log_both <- function(x){ifelse(x == 0, 0, log(abs(x)) * sign(x))}
log_both_trans <-
function(){
trans_new(name = 'log_both',
transform = log_both,
inverse = log_both) #not clear what `inverse` does
}
df <-
tibble(y = (-10:10),
x = (y^4)*sign(y))
ggplot(df) +
#no transformation
geom_point(aes(factor(x), y = 1, fill = x), shape = 21, size = 10) +
scale_fill_gradient2(low = "blue", mid = "white", high = "red") +
#transformed
geom_point(aes(factor(x), y = - 1, color = x), size = 10) +
scale_color_gradient2(low = "blue", mid = "white", high = "red", trans = "log_both") +
ylim(-2, 2) +
labs(colour = "transformed", fill = "default", x = "", y = "")
The argument inverse
takes a function that is the mathematical inverse of your original transformation. If you log transform the inverse is exponentiation. The inverse is required to calculate the labels that correspond to the chosen breaks. (You log-transform to obtain your scaled data, and then you inverse-transform to obtain your labels. See also this SO post.)
library(scales)
library(tidyverse)
log_both <- function(x){ifelse(x == 0, 0, log(abs(x)) * sign(x))}
exp_both <- function(x){exp(abs(x)) * sign(x)} # this is the inverse of log_both
log_both_trans <-
function(){
trans_new(name = 'log_both',
transform = log_both,
inverse = exp_both)
}
df <-
tibble(y = (-10:10),
x = (y^4)*sign(y))
ggplot(df) +
#no transformation
geom_point(aes(factor(x), y = 1, fill = x), shape = 21, size = 10) +
scale_fill_gradient2(low = "blue", mid = "white", high = "red",
guide = guide_colorbar(order = 1)) +
#transformed
geom_point(aes(factor(x), y = - 1, color = x), size = 10) +
scale_color_gradient2(low = "blue", mid = "white", high = "red",
trans = "log_both",
breaks = c(-10000, -100, 0, 100, 10000), # desired breaks on transformed scale
guide = guide_colorbar(order = 2)) +
ylim(-2, 2) +
labs(colour = "transformed", fill = "default", x = "", y = "")
The lines guide = guide_colorbar(order = 1)
and guide = guide_colorbar(order = 2)
are there only to make sure the legends show in the right order. Otherwise they appear in random order.
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