How to diagnose errors in LaTeX generated by Doxygen 1.8.x: LT@LL@FM@cr
I've been using Doxygen successfully to generate PDF documentation for a sizable Fortran 90 project since v1.6. After a recent upgrade to Doxygen 1.8, pdflatex is choking with an error I can't understand. From refman.log:
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<use classfate__source_a022bf629bdc1d3059ebd5fb86d13b4f4_icgraph.pdf>
Package pdftex.def Info: classfate__source_a022bf629bdc1d3059ebd5fb86d13b4f4_ic
graph.pdf used on input line 607.
(pdftex.def) Requested size: 350.0pt x 65.42921pt.
)
(./classm__aerosol.tex
! Undefined control sequence.
<recently read> LT@LL@FM@cr
l.25 ...1833ffa6f2fae54ededb}{ia-_-nsize}), *
? ?
Type <return> to proceed, S to scroll future error messages,
R to run without stopping, Q to run quietly,
I to insert something, E to edit your file,
1 or ... or 9 to ignore the next 1 to 9 tokens of input,
H for help, X to quit.
Looking at the first 25 lines of classm__aerosol.tex, nothing obviously matches the error message:
hypertarget{classm__aerosol}{section{m-_-aerosol Module Reference}
label{classm__aerosol}index{m-_-aerosol@{m-_-aerosol}}
}
Contains general aerosol-/related constants and routines.
subsection*{Public Member Functions}
begin{DoxyCompactItemize}
item
subroutine hyperlink{classm__aerosol_aa06c1f39c6bd34f22be92d21535f0320}{aerdis} (I-A-E-R-O, M-A-E-R-O, V-O-L, A-R-E-A, M-U, T-G-A-S, R-H-O, A-G-A-M-M-A, X-L-A-E-R, D-M-E-A-N, N-A-E-R, X-N-D-A-E-R, L-S-D-A-E-R)
begin{DoxyCompactList}smallitemem Return aerosol mass given a volume, based on aerosol size distribution function. end{DoxyCompactList}item
real(kind=wp) function hyperlink{classm__aerosol_a2dff4ff413057e8788fba7270a30c093}{lamsed} (V-O-L, H, M-U-G, R-H-O-A-E-R, A-G-A-M-M-A, A-C-H-I, A-F-E-O, K-O, M-A-E-R, F-M-A-E-R, F-A-E-R-S-S, F-S-E-D-D-K)
begin{DoxyCompactList}smallitemem Calculate aerosol removal constant and interpolation factor between steady-/state and decaying aerosol correlations. end{DoxyCompactList}item
pure real(kind=wp) function hyperlink{classm__aerosol_a6d0a04004f49c404c67e0aa69dd39ee1}{fdbend} (V-E-L, H-S-E-D, T-G, R-H-O-G, M-U-G, R-H-O-P-A-R, C-A-E-R-O, X-D-B-E-N-D, N90-J)
begin{DoxyCompactList}smallitemem Find total impaction efficiency for aerosol deposition considering 90-/degree bends in a flow path. end{DoxyCompactList}end{DoxyCompactItemize}
subsection*{Public Attributes}
begin{DoxyCompactItemize}
item
integer, parameter hyperlink{classm__aerosol_a8f604b7ffe3c1833ffa6f2fae54ededb}{ia-_-nsize} = 30
item
integer, parameter hyperlink{classm__aerosol_ae71813ecf0c7768af9d6292efb14774f}{ia-_-nmass} = 10
item
real(kind=wp), dimension(hyperlink{classm__aerosol_a8f604b7ffe3c1833ffa6f2fae54ededb}{ia-_-nsize}), *
Nothing obviously matches the recently read chunk "LT@LL@FM@cr" and I don't know enough low-level TeX to translate that into something that might actually be in the source text.
Suspecting this might have been fixed in a later version of Doxygen than the one shipping with Linux Mint (v1.8.1.2), I built & installed v1.8.3.1 from source, updated my doxyfile, blew away the old documentation and regenerated it. I get the same baffling error.
There's nothing obvious in refman.log that would indicate missing or broken LaTeX packages and I'm completely at a loss as to what's causing this.
this will be difficult to solve unless you provide a bit more information - possibly using errorcontextlines=9999 as suggested in the comments on the question.
as a first short though, the name of the control sequence that can't be found (ie LT@LL@FM@cr ) is one defined by the longtable package (documentation, p. 15) - thus adding:
usepackage{longtable}
to the preamble of the document might help.
If so, according to the doxygen documentation here, adding the following to your configuration file should do the trick:
EXTRA_PACKAGES=longtable
As this still gets a hit on Google when you search: doxygen missing $ inserted I would like to add something.
Do not use a PROJECT_NAME containing underscores ( _ )!
After a brief look into the doxygen's current documentation (I am using 1.8.4) it does not make that explicit.
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