Centos 6.3 R安装错误

2018-07-02 20:52:03

我是新手centos，所以我试图安装R.它的安装，但当我写控制台时给这个错误

dyn.load中的错误（文件，DLLpath = DLLpath，...）：无法加载共享对象'/usr/lib64/R/library/utils/libs/utils.so'：
/usr/lib64/R/library/utils/libs/utils.so：undefined symbol：libssh2_agent_disconnect另外：警告消息：未找到options（“defaultPackages”）中的包“methods”错误：package'grDevices'没有命名空间此外：警告消息：1：未找到选项（“defaultPackages”）中的'utils'包2：未找到包中的'grDevices'（“defaultPackages”）错误：package'grDevices'没有命名空间此外：警告消息：未找到options（“defaultPackages”）中的package'graphics'dyn.load中的错误（file，DLLpath = DLLpath，...）：无法加载共享对象'/ usr / lib64 / R /library/methods/libs/methods.so“：
/usr/lib64/R/library/methods/libs/methods.so：undefined symbol：libssh2_agent_disconnect另外：警告消息：未找到options（“defaultPackages”）中的package'stats'在启动期间 - 警告消息：package'方法'选项（“defaultPackages”）未找到

这个错误是什么？我不能任何功能。例如;

install.packages("test")

错误：找不到函数“install.packages”

谢谢

更新libssh2为我解决了这个问题

下面，我分享我的安装R的经验，因为我有一个类似的问题，通过简单地更新libssh2软件包就可以解决一些问题，然后解决这个问题！

安装R版本3，一旦启动，它会抛出各种有关未能加载共享对象的错误，每个错误都以“undefined symbol：libssh2_exit”这个魔术错误结束，我试图找出这些对象有什么问题，并且试图强制使用ldconfig加载它们，但是我所有的尝试都是徒劳的！这些文件存在，并且他们看起来不会被破坏

{
[root@Centos6-vtl-sb ~]# R

Error in dyn.load(file, DLLpath = DLLpath, ...) :
  unable to load shared object '/usr/lib64/R/library/methods/libs/methods.so':
  /usr/lib64/R/library/methods/libs/methods.so: undefined symbol: libssh2_exit

R version 3.3.3 (2017-03-06) -- "Another Canoe"
Copyright (C) 2017 The R Foundation for Statistical Computing
Platform: x86_64-redhat-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

  Natural language support but running in an English locale

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

Error in dyn.load(file, DLLpath = DLLpath, ...) :
  unable to load shared object '/usr/lib64/R/library/utils/libs/utils.so':
  /usr/lib64/R/library/utils/libs/utils.so: undefined symbol: libssh2_exit

In addition: Warning message:
package "methods" in options("defaultPackages") was not found

Error in dyn.load(file, DLLpath = DLLpath, ...) :
  unable to load shared object '/usr/lib64/R/library/grDevices/libs/grDevices.so':
  /usr/lib64/R/library/grDevices/libs/grDevices.so: undefined symbol: libssh2_exit

In addition: Warning message:
package "utils" in options("defaultPackages") was not found

Error in dyn.load(file, DLLpath = DLLpath, ...) :
  unable to load shared object '/usr/lib64/R/library/grDevices/libs/grDevices.so':
  /usr/lib64/R/library/grDevices/libs/grDevices.so: undefined symbol: libssh2_exit

In addition: Warning message:
package "grDevices" in options("defaultPackages") was not found

Error in dyn.load(file, DLLpath = DLLpath, ...) :
  unable to load shared object '/usr/lib64/R/library/grDevices/libs/grDevices.so':
  /usr/lib64/R/library/grDevices/libs/grDevices.so: undefined symbol: libssh2_exit

In addition: Warning message:
package "graphics" in options("defaultPackages") was not found

Error in dyn.load(file, DLLpath = DLLpath, ...) :
  unable to load shared object '/usr/lib64/R/library/methods/libs/methods.so':
  /usr/lib64/R/library/methods/libs/methods.so: undefined symbol: libssh2_exit

In addition: Warning message:
package "stats" in options("defaultPackages") was not found

During startup - Warning message:
package "methods" in options("defaultPackages") was not found

> quit()

Save workspace image? [y/n/c]: n

[root@Centos6-vtl-sb ~]# ls /usr/lib64/R/library/methods/libs/methods.so
/usr/lib64/R/library/methods/libs/methods.so
[root@Centos6-vtl-sb ~]#

}

最后我决定检查libssh2版本，发现我的版本是现代版本，一旦我更新它，那些错误就消失了

{

[root@Centos6-vtl-sb ~]# yum whatprovides libssh2

Loaded plugins: fastestmirror, refresh-packagekit

Loading mirror speeds from cached hostfile
 * base: mirror.steadfast.net
 * centosplus: mirror.steadfast.net
 * elrepo: mirrors.ircam.fr
 * epel: ftp.upjs.sk
 * extras: mirror.steadfast.net
 * updates: mirror.steadfast.net

libssh2-1.4.2-2.el6_7.1.x86_64 : A library implementing the SSH2 protocol
Repo        : base
Matched from:

libssh2-1.4.2-2.el6_7.1.i686 : A library implementing the SSH2 protocol
Repo        : base
Matched from:

libssh2-1.2.2-7.el6.x86_64 : A library implementing the SSH2 protocol
Repo        : installed
Matched from:
Other       : Provides-match: libssh2

[root@Centos6-vtl-sb ~]# rpm -qa | grep -i libssh
libssh2-1.2.2-7.el6.x86_64
[root@Centos6-vtl-sb ~]#

[root@Centos6-vtl-sb ~]#
[root@Centos6-vtl-sb ~]# yum update libssh2
.......

[root@Centos6-vtl-sb ~]# R

R version 3.3.3 (2017-03-06) -- "Another Canoe"
Copyright (C) 2017 The R Foundation for Statistical Computing
Platform: x86_64-redhat-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

  Natural language support but running in an English locale

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

>
> quit()
Save workspace image? [y/n/c]: y
[root@Centos6-vtl-sb ~]#
}

谢里夫

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